Topmodel - Revision history

Wbuytaert at 14:54, 11 February 2009

2009-02-11T14:54:57Z

Wbuytaert at 19:17, 30 September 2008

2008-09-30T19:17:55Z

Wbuytaert at 13:03, 5 September 2008

2008-09-05T13:03:27Z

Wbuytaert at 16:25, 14 August 2008

2008-08-14T16:25:14Z

Wbuytaert at 21:12, 2 August 2008

2008-08-02T21:12:00Z

Wbuytaert at 18:28, 2 August 2008

2008-08-02T18:28:09Z

Wbuytaert at 18:27, 2 August 2008

2008-08-02T18:27:26Z

Wbuytaert at 09:10, 2 August 2008

2008-08-02T09:10:13Z

Wbuytaert at 04:20, 5 May 2008

2008-05-05T04:20:04Z

Wbuytaert at 02:57, 5 May 2008

2008-05-05T02:57:13Z

@@ Line 4: / Line 4: @@
 ==Introduction==
-The TOPMODEL package contains an implementation of the venerable TOPMODEL, along with some other useful functions. Although the package has been tested extensively, it may be contain bugs. All feedback is welcome (see the feedback page).
+The TOPMODEL package contains an implementation of the venerable TOPMODEL, along with some other useful functions. Although the package has been tested extensively, it may contain bugs. All feedback is welcome (see the feedback page).
 Thanks go to [http://www.lec.lancs.ac.uk/cswm/Staff_kb.php Keith Beven], who wrote the original TOPMODEL in Fortran, and [http://geni.ath.cx/ Huidae Cho], for the C code base (originally implemented in [http://grass.osgeo.org/ GRASS GIS])

← Older revision		Revision as of 19:17, 30 September 2008
Line 40:		Line 40:
	The package is in fact a wrapper around a set of C libraries. This makes it easy to recycle the libraries and link them in C programs or other languages (Fortran, C++, Python, ...). For access to the libraries, download the [http://cran.r-project.org/src/contrib/topmodel_0.5.tar.gz source package], extract it, and look into the src/ subdirectory.		The package is in fact a wrapper around a set of C libraries. This makes it easy to recycle the libraries and link them in C programs or other languages (Fortran, C++, Python, ...). For access to the libraries, download the [http://cran.r-project.org/src/contrib/topmodel_0.5.tar.gz source package], extract it, and look into the src/ subdirectory.

−	Only the file topmodel.c contains some R-specific functions (they start with R_) related to output in the R console. This file implements the monte-carlo simulation. The model itself can be found in core_topmodel.r and subroutines.	+	Only the file topmodel.c contains some R-specific functions (they start with R_) related to output in the R console. This file implements the monte-carlo simulation. The model itself can be found in core_topmodel.c and subroutines.

← Older revision		Revision as of 13:03, 5 September 2008
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	* ''topidx()'' calculates the topographic index from a raster DEM		* ''topidx()'' calculates the topographic index from a raster DEM
	* ''topmodel()'' implements the original model		* ''topmodel()'' implements the original model
		+
		+	==Raw libraries==
		+
		+	The package is in fact a wrapper around a set of C libraries. This makes it easy to recycle the libraries and link them in C programs or other languages (Fortran, C++, Python, ...). For access to the libraries, download the [http://cran.r-project.org/src/contrib/topmodel_0.5.tar.gz source package], extract it, and look into the src/ subdirectory.
		+
		+	Only the file topmodel.c contains some R-specific functions (they start with R_) related to output in the R console. This file implements the monte-carlo simulation. The model itself can be found in core_topmodel.r and subroutines.

@@ Line 9: / Line 9: @@
 For a fully documented example, see the [[Running Topmodel]] page.
 ==Installation==
-===Windows===
+Topmodel is available from the [http://cran.r-project.org/mirrors.html Comprehensive R Archive Network]. It can be installed directly from within R with:
-Go to the Package Installer (Packages and Data menu), select "Local Binary Package", click install and select the downloaded package
+  install.packages("topmodel")
 ==Loading==

@@ Line 12: / Line 12: @@
 ==Downloads==
-* [http://www.paramo.be/topmodel/topmodel_0.3.zip Windows binary]
+* [http://www.paramo.be/topmodel/topmodel_0.5.zip Windows binary]
-* [http://www.paramo.be/topmodel/topmodel_0.3.tar.gz Linux source package]
+* [http://www.paramo.be/topmodel/topmodel_0.5.tar.gz Linux source package]
-* [http://www.paramo.be/topmodel/topmodel_0.3.tgz Universal MacOS X package]
+* [http://www.paramo.be/topmodel/topmodel_0.5.tgz Universal MacOS X package]
 ==Installation==
@@ Line 26: / Line 26: @@
 Use the normal procedure of installing a package in R:
-    > R CMD install topmodel_0.3.tar.gz
+    > R CMD install topmodel_0.5.tar.gz
 Developer tools, including gcc, must be installed.
@@ Line 38: / Line 38: @@
 Once in R you need to load the package before you can use it:
-    > library(topmodel)
+    library(topmodel)
 ==Function overview==
@@ Line 44: / Line 44: @@
 Full documentation is provided in the package, and can be opened with:
-    > help.start()
+    help.start()

@@ Line 8: / Line 8: @@
 Thanks go to [http://www.lec.lancs.ac.uk/cswm/Staff_kb.php Keith Beven], who wrote the original TOPMODEL in Fortran, and [http://geni.ath.cx/ Huidae Cho], for the C code base (originally implemented in [http://grass.osgeo.org/ GRASS GIS])
-For a fully documented example, see the [[hydrology in R]] pages
+For a fully documented example, see the [[running topmodel]] page.
 ==Downloads==

← Older revision		Revision as of 04:20, 5 May 2008
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		+	[[Category:Projects]]
		+	[[Category:Hydrology in R]]
		+
	==Introduction==		==Introduction==

@@ Line 3: / Line 3: @@
 The package TOPMODEL contains some functions and code snippets for hydrological data analysis with R, that may eventually make it into a properly released R package. For now, the code can be downloaded on this page and used at your own risk, without official support (although I very much welcome all feedback). The core of the package is an implementation of the venerable TOPMODEL.
-Information on R, including downloads, installation and a great choice of manuals can be found on the R website. If you follow strictly the examples used below, you will be able to run TOPMODEL with a very limited R knowledge. However, R has a great potential for pre- en postprocessing of the data (including uncertainty analysis and statistics), so a more extensive knowledge of R is highly recommended!
+Information on R, including downloads, installation and a great choice of manuals can be found on the [http://www.r-project.org R website]. If you follow strictly the examples used below, you will be able to run TOPMODEL with a very limited R knowledge. However, R has a great potential for pre- en postprocessing of the data (including uncertainty analysis and statistics), so a more extensive knowledge of R is highly recommended!
-Thanks go to Keith Beven, who wrote the original TOPMODEL in Fortran, and Huidae Cho, for the C code base (originally implemented in GRASS GIS)
+Thanks go to [http://www.lec.lancs.ac.uk/cswm/Staff_kb.php Keith Beven], who wrote the original TOPMODEL in Fortran, and [http://geni.ath.cx/ Huidae Cho], for the C code base (originally implemented in [http://grass.osgeo.org/ GRASS GIS])
 For a fully documented example, see the [[hydrology in R]] pages
 ==Downloads==