Difference between revisions of "Digital terrain analysis with RHydro"

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This is an example using the DEM supplied with the package. Load the package and the DEM:
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The digital terrain analysis tools are now merged with the topmodel package. A revised guide can be found at [http://wiki.r-project.org/rwiki/doku.php?id=guides:tutorials:hydrological_data_analysis:dta|the R wiki]
 
 
  library(RHydro)
 
  data(huagrahuma.dem)
 
 
 
Fill depression and look at the difference between the original and filled map:
 
 
  dem.filled <- sinkfind(huagrahuma.dem, cellsize=25, degree=0.1)
 
  library(lattice)
 
  levelplot(dem.filled)
 
 
 
  difference <- dem.filled - huagrahuma.dem
 
  max(difference)
 
  min(difference)
 
  levelplot(difference)
 
 
 
Topographic index calculation:
 
 
 
  topidx <- atb(dem.filled, cellsize=25)
 
  class(topidx)
 
  str(topidx)
 
  levelplot(topidx$atb)
 
  levelplot(topidx$area)
 
 
 
If you want, you can compare with the analysis on the non-filled DEM that contains obvious artefacts
 
 
 
  old <- atb(huagrahuma.dem, cellsize=25)
 
  levelplot(old$area)
 
  levelplot(topidx$area - old$area)
 
 
 
Have a look at the potential outlet:
 
 
 
  outlet(topidx$area,c(28,8),2)
 
 
 
We know from manual catchment delineation (on a topographic map) that the area of the catchment is around 2.4 km2, so the following cells are likely to contain the outlet: c(28,8); c(29,8); c(29,9). Just try them out with the subcatch() function and take the one you like.
 
 
 
  catchment <- subcatch(dem.filled, c(29,8))
 
  image(catchment)
 
  catchment[catchment == 0] <- NA
 
 
 
  flowlength <- flowlength(dem.filled, c(29,8))
 
 
 
Headwater cells are identified on the basis of a topographic index
 
or an accumulation area threshold. This is an “intuitive” choice:
 
 
 
  rivers <- river(dem.filled,topidx$atb,topidx$area,cellsize=25,thatb=12.35,tharea=10000)
 
  image(rivers)
 
 
 
Play around with the values of thatb and tharea and look at the impact…
 
 
 
Mask the rivers and topographic index maps outside the catchment:
 
 
 
  rivers <- rivers * catchment
 
  topidxmap <- topidx$atb * catchment
 
 
 
Eliminate the NA values from the topidxmap:
 
 
 
  topidxarray <- as.vector(topidxmap)
 
  topidxarray <- topidxarray[!is.na(topidxarray)]
 
 
 
And make topographic index classes which can be used with topmodel:
 
 
 
  classes <- make.classes(topidxarray,16)
 
  plot(classes)
 
 
 
The object ''classes'' can be used as input for [[topmodel]]
 

Latest revision as of 09:12, 28 August 2009

The digital terrain analysis tools are now merged with the topmodel package. A revised guide can be found at R wiki